After being disqualified on one satellite, do I need to manually clean out the files for that sat?

It will not be deleted automatically, so you may clean it up.
The useful info:

You may also exclude this satellite from the dashboard using parameter:

storagenode setup --help | sls exclu

      --storage2.trust.exclusions trust-exclusions               list of trust exclusions  

Use it as an argument (for docker version), or add/uncomment it in the config.yaml file. Save the change and restart the node.
For example:

storage2.trust.exclusions: "12rfG3sh9NCWiX3ivPjq2HtdLmbqCrvHVEzJubnzFzosMuawymB@europe-north-1.tardigrade.io:7777,1wFTAgs9DP5RSnCqKV1eLf6N9wtk4EAtmN5DpSxcs8EjT69tGE@saltlake.tardigrade.io:7777"
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